C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sarcoglycan, alpha (dystrophin-associated glycoprotein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152042 Sgca-002 ENSMUSG00000001508 10090 - 11:94972226-94973489 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLungOvaryPlacentaENSMUST00000152042
Transcript ID Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta
ENSMUST00000152042 28.468±5.90 0.286±0.00 89.701±89.68 13.949±3.83 410.770±108.55 4.760±2.59 10.838±2.23 6.215±3.71 0.300±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088W CIL_00088W_0002 VISTA 11:94580928-95183811

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005887 TAS integral component of plasma membrane
GO:0005911 IDA cell-cell junction
GO:0006936 IEA muscle contraction
GO:0007517 IEA muscle organ development
GO:0016011 IDA dystroglycan complex
GO:0016012 IEA sarcoglycan complex
GO:0042383 IDA sarcolemma
GO:0045121 IDA membrane raft
GO:0061024 TAS membrane organization

Homologs

No Homologs available.

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