C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: isovaleryl coenzyme A dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152191 Ivd-007 ENSMUSG00000027332 10090 + 2:118875707-118881015 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverMuscleOvaryPlacentaTestisENSMUST00000152191
Transcript ID Adipose Brain Colon Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000152191 37.600±17.36 11.276±2.57 12.698±0.00 59.459±0.00 16.970±7.35 29.757±2.49 19.661±0.00 7.932±1.62 7.132±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070I CIL_00070I_0002 CGP 2:118814003-118882909
CIL_00070J CIL_00070J_0002 CGP 2:118861954-118924528

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000466756 IVD-008 protein_coding Homo_sapiens 2e-21 106
ENST00000479013 IVD-002 protein_coding Homo_sapiens 0 625
ENST00000481262 IVD-010 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000487418 IVD-001 protein_coding Homo_sapiens 0 625
ENST00000491554 IVD-009 protein_coding Homo_sapiens 0 405
ENST00000497252 IVD-007 processed_transcript Homo_sapiens 0 470
ENST00000497816 IVD-003 retained_intron Homo_sapiens 0 540
ENST00000559575 IVD-012 protein_coding Homo_sapiens 4e-22 108

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