C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eva-1 homolog C (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152223 Eva1c-007 ENSMUSG00000039903 10090 + 16:90830867-90904653 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000152223
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000152223 0.638±0.37 0.872±0.28 1.806±0.56 0.418±0.16 0.277±0.03 0.410±0.15 0.168±0.03 0.693±0.21 0.087±0.04 2.867±0.84 0.061±0.00 1.510±0.92 0.932±0.53 2.829±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KX CIL_0003KX_0002 CGP 16:90751527-90905109
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300255 EVA1C-001 protein_coding Homo_sapiens 0 1037
ENST00000382699 EVA1C-002 protein_coding Homo_sapiens 0 1011
ENST00000401402 EVA1C-013 protein_coding Homo_sapiens 0 375
ENST00000412833 EVA1C-008 protein_coding Homo_sapiens 0 472
ENST00000435323 EVA1C-005 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000437338 EVA1C-007 nonsense_mediated_decay Homo_sapiens 0 1282
ENST00000457807 EVA1C-006 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000459833 EVA1C-009 processed_transcript Homo_sapiens 0 348
ENST00000464037 EVA1C-003 retained_intron Homo_sapiens 0 1037
ENST00000469079 EVA1C-004 retained_intron Homo_sapiens 0 375
ENST00000496615 EVA1C-011 processed_transcript Homo_sapiens 0 377

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