C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152529 Pif1-005 ENSMUSG00000041064 10090 + 9:65587213-65595967 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverLungOvaryPlacentaENSMUST00000152529
Transcript ID Adipose Adrenal Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000152529 0.019±0.00 0.086±0.00 0.266±0.00 0.087±0.03 0.043±0.01 0.044±0.00 0.239±0.06 0.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RY CIL_0007RY_0002 VISTA 9:65081642-65684657
CIL_0008H0 CIL_0008H0_0002 VISTA 9:65525988-66127110

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268043 PIF1-001 protein_coding Homo_sapiens 0 479
ENST00000333425 PIF1-002 protein_coding Homo_sapiens 0 479
ENST00000558380 PIF1-010 retained_intron Homo_sapiens 0 662
ENST00000558547 PIF1-011 retained_intron Homo_sapiens 0 202
ENST00000559239 PIF1-006 protein_coding Homo_sapiens 0 479
ENST00000559872 PIF1-009 retained_intron Homo_sapiens 1e-34 150
ENST00000560444 PIF1-004 retained_intron Homo_sapiens 0 641

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