C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: schlafen 10, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152760 Slfn10-ps-001 ENSMUSG00000072621 10090 - 11:83028855-83036166 transcribed_unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000152760
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000152760 0.058±0.02 0.151±0.04 0.011±0.00 0.110±0.00 0.039±0.00 0.040±0.01 0.029±0.02 0.092±0.02 0.026±0.01 0.118±0.05 0.009±0.00 0.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RF CIL_0003RF_0003 CGP 11:83002158-83070678

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285013 SLFN13-002 protein_coding Homo_sapiens 0 1014
ENST00000308377 SLFN11-002 protein_coding Homo_sapiens 0 909
ENST00000394566 SLFN11-001 protein_coding Homo_sapiens 0 909
ENST00000526861 SLFN13-004 protein_coding Homo_sapiens 0 1014
ENST00000530782 SLFN13-001 nonsense_mediated_decay Homo_sapiens 0 806
ENST00000532210 SLFN13-007 protein_coding Homo_sapiens 0 209
ENST00000532774 SLFN13-010 retained_intron Homo_sapiens 0 381
ENST00000533791 SLFN13-005 protein_coding Homo_sapiens 0 1014
ENST00000534689 SLFN13-003 protein_coding Homo_sapiens 0 806
ENST00000542635 SLFN13-201 protein_coding Homo_sapiens 0 1014
ENST00000586099 SLFN11-013 retained_intron Homo_sapiens 0.00000000003 73

Loading