C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | cancer susceptibility candidate 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000153300  |
Casc5-003 |
ENSMUSG00000027326 |
10090 | + |
2:119047147-119065972  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00070F | CIL_00070F_0002 | CGP | 2:119034790-119105501 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003674 | ND | molecular_function |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000346991
|
CASC5-002 | protein_coding | Homo_sapiens | 0 | 289 |
|
ENST00000399668
|
CASC5-001 | protein_coding | Homo_sapiens | 0 | 289 |
|
ENST00000527044
|
CASC5-201 | protein_coding | Homo_sapiens | 0 | 289 |
|
ENST00000528975
|
CASC5-005 | protein_coding | Homo_sapiens | 5.99756e-43 | 178 |
|
ENST00000532056
|
CASC5-006 | protein_coding | Homo_sapiens | 9e-28 | 126 |
|
ENST00000533001
|
CASC5-004 | retained_intron | Homo_sapiens | 0 | 289 |
|
ENST00000534204
|
CASC5-007 | nonsense_mediated_decay | Homo_sapiens | 8.99998e-41 | 171 |
|
ENST00000614337
|
CASC5-003 | processed_transcript | Homo_sapiens | 0 | 289 |
