C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cancer susceptibility candidate 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533001 CASC5-004 ENSG00000137812 9606 + 15:40594265-40626042 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLungENST00000533001
Transcript ID Bladder Heart Lung
ENST00000533001 0.120±0.00 0.017±0.00 0.185±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070F CIL_00070F_0001 CGP 15:40569300-40664342

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099542 Casc5-201 protein_coding Mus_musculus 0 817
ENSMUST00000028802 Casc5-004 protein_coding Mus_musculus 0 817
ENSMUST00000028799 Casc5-001 protein_coding Mus_musculus 0 817
ENSMUST00000152380 Casc5-002 protein_coding Mus_musculus 0 699
ENSMUST00000153300 Casc5-003 protein_coding Mus_musculus 0 289

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