C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cancer susceptibility candidate 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027326 Casc5 10090 + 2:119047119-119105501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028799 Casc5-001 119047150-119072919 protein_coding
  ENSMUST00000028802 Casc5-004 119057281-119105501 protein_coding
  ENSMUST00000099542 Casc5-201 119047119-119104121 protein_coding
  ENSMUST00000152380 Casc5-002 119047119-119069271 protein_coding
  ENSMUST00000153300 Casc5-003 119047147-119065972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028799ENSMUST00000028802ENSMUST00000099542
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028799 0.014±0.00 0.153±0.08 N/A N/A 0.066±0.03 0.076±0.00 0.008±0.00 0.021±0.01 0.014±0.00 0.055±0.00 N/A 0.368±0.08 0.027±0.00 N/A
ENSMUST00000028802 0.039±0.01 0.042±0.00 N/A 0.122±0.06 0.151±0.03 N/A 0.031±0.00 0.034±0.01 3.441±2.88 0.062±0.00 0.011±0.01 0.395±0.27 0.907±0.76 0.211±0.02
ENSMUST00000099542 N/A N/A 0.074±0.00 N/A N/A N/A N/A 0.010±0.00 0.013±0.00 N/A 0.007±0.00 0.353±0.24 3.120±0.00 1.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070F CIL_00070F_0002 CGP 2:119034790-119105501

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0001669 IEA acrosomal vesicle
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007059 IEA chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0008608 IEA attachment of spindle microtubules to kinetochore
GO:0010923 ISS negative regulation of phosphatase activity
GO:0034501 IEA protein localization to kinetochore
GO:0070062 IEA extracellular vesicular exosome
GO:0071173 IEA spindle assembly checkpoint

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070239 casc5 cancer susceptibility candidate 5 protein_coding Danio_rerio
ENSG00000137812 CASC5 cancer susceptibility candidate 5 protein_coding Homo_sapiens

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