C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit epsilon
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153740 Gabre-003 ENSMUSG00000031340 10090 - X:72268968-72274803 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverLungOvaryENSMUST00000153740
Transcript ID Adrenal Colon Liver Lung Ovary
ENSMUST00000153740 0.277±0.03 0.146±0.02 0.007±0.00 0.553±0.18 0.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000118 CIL_000118_0002 CGP X:72222017-72274803

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370328 GABRE-001 protein_coding Homo_sapiens 1e-31 143
ENST00000441219 GABRE-005 nonsense_mediated_decay Homo_sapiens 5e-32 143
ENST00000465405 GABRE-006 retained_intron Homo_sapiens 3e-36 156
ENST00000528117 TMEM9B-003 protein_coding Homo_sapiens 0.000001 58

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