C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: gamma-aminobutyric acid (GABA) A receptor, epsilon
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000370328 GABRE-001 ENSG00000102287 9606 - X:151953124-151974679 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000370328
Transcript ID Brain
ENST00000370328 0.136±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000118 CIL_000118_0001 CGP X:151912509-151974680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 IEA ion transport
GO:0007214 TAS gamma-aminobutyric acid signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034707 IEA chloride channel complex
GO:0045211 IEA postsynaptic membrane
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064780 Gabre-001 protein_coding Mus_musculus 0 966
ENSMUST00000148499 Gabre-004 processed_transcript Mus_musculus 7.00649e-44 183
ENSMUST00000153740 Gabre-003 retained_intron Mus_musculus 1e-31 143

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