C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dysferlin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153860 Dysf-006 ENSMUSG00000033788 10090 + 6:84149869-84211057 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000153860
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000153860 6.271±2.73 4.446±0.35 3.757±0.06 0.647±0.33 14.189±0.00 3.686±0.51 0.620±0.32 4.320±0.00 2.888±0.01 7.506±4.73 0.508±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082S CIL_00082S_0002 VISTA 6:83890934-84492863
CIL_00083T CIL_00083T_0002 VISTA 6:83896001-84498367
CIL_0003BS CIL_0003BS_0002 CGP 6:83914353-84211060
CIL_0003BT CIL_0003BT_0002 CGP 6:84008590-84593908

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000258104 DYSF-001 protein_coding Homo_sapiens 0 2298
ENST00000394120 DYSF-003 protein_coding Homo_sapiens 0 2298
ENST00000409366 DYSF-006 protein_coding Homo_sapiens 0 2828
ENST00000409582 DYSF-011 protein_coding Homo_sapiens 0 2828
ENST00000409651 DYSF-002 protein_coding Homo_sapiens 0 2298
ENST00000409744 DYSF-005 protein_coding Homo_sapiens 0 2828
ENST00000409762 DYSF-004 protein_coding Homo_sapiens 0 2298
ENST00000410020 DYSF-007 protein_coding Homo_sapiens 0 2828
ENST00000410041 DYSF-009 protein_coding Homo_sapiens 0 2298
ENST00000413539 DYSF-021 protein_coding Homo_sapiens 0 2298
ENST00000429174 DYSF-020 protein_coding Homo_sapiens 0 2828
ENST00000468173 DYSF-014 processed_transcript Homo_sapiens 0 608
ENST00000479049 DYSF-016 processed_transcript Homo_sapiens 0 2298
ENST00000487180 DYSF-013 processed_transcript Homo_sapiens 0 440

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