C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: retinol dehydrogenase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153935 Rdh5-002 ENSMUSG00000025350 10090 - 10:128917301-128919297 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000153935
Transcript ID Ovary
ENSMUST00000153935 6.150±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007HO CIL_0007HO_0002 CGP 10:128913593-128924035

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257895 RDH5-001 protein_coding Homo_sapiens 0 708
ENST00000257899 BLOC1S1-004 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000547072 RDH5-008 protein_coding Homo_sapiens 0 516
ENST00000548082 RDH5-002 protein_coding Homo_sapiens 0 660
ENST00000548486 RDH5-004 retained_intron Homo_sapiens 0 529
ENST00000550412 BLOC1S1-001 protein_coding Homo_sapiens 0 335
ENST00000550608 RDH5-003 retained_intron Homo_sapiens 0 699
ENST00000551946 BLOC1S1-002 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000553187 RDH5-009 retained_intron Homo_sapiens 0 529

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