C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: F-box protein 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153970 Fbxo22-002 ENSMUSG00000032309 10090 + 9:55208986-55224431 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000153970
Transcript ID Ovary Placenta
ENSMUST00000153970 19.056±0.26 7.170±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024C CIL_00024C_0002 CGP 9:55148854-55224433
CIL_000249 CIL_000249_0002 CGP 9:55208925-55326844

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000209 IDA protein polyubiquitination
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006913 IDA nucleocytoplasmic transport
GO:0009267 IDA cellular response to starvation
GO:0010830 IMP regulation of myotube differentiation
GO:0032436 IMP positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0048742 IMP regulation of skeletal muscle fiber development
GO:2000060 IMP positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308275 FBXO22-001 protein_coding Homo_sapiens 0 1349
ENST00000453211 FBXO22-003 protein_coding Homo_sapiens 0 865
ENST00000561885 FBXO22-008 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000564220 FBXO22-009 protein_coding Homo_sapiens 0 315
ENST00000565036 FBXO22-006 protein_coding Homo_sapiens 0 359
ENST00000569022 FBXO22-004 nonsense_mediated_decay Homo_sapiens 0 1195
ENST00000569054 FBXO22-007 protein_coding Homo_sapiens 0 863
ENST00000569749 FBXO22-002 nonsense_mediated_decay Homo_sapiens 0 483

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