C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eva-1 homolog C (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154180 Eva1c-006 ENSMUSG00000039903 10090 + 16:90846398-90890615 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverENSMUST00000154180
Transcript ID Heart Liver
ENSMUST00000154180 0.144±0.00 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003KX CIL_0003KX_0002 CGP 16:90751527-90905109
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300255 EVA1C-001 protein_coding Homo_sapiens 0 713
ENST00000382699 EVA1C-002 protein_coding Homo_sapiens 0 713
ENST00000401402 EVA1C-013 protein_coding Homo_sapiens 0 640
ENST00000412833 EVA1C-008 protein_coding Homo_sapiens 0 721
ENST00000435323 EVA1C-005 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000437338 EVA1C-007 nonsense_mediated_decay Homo_sapiens 0 449
ENST00000459833 EVA1C-009 processed_transcript Homo_sapiens 0 267
ENST00000464037 EVA1C-003 retained_intron Homo_sapiens 0 715
ENST00000469079 EVA1C-004 retained_intron Homo_sapiens 0 640
ENST00000490376 RP11-740N7.3-001 processed_pseudogene Homo_sapiens 0 254
ENST00000493276 RP11-803B1.2-001 unprocessed_pseudogene Homo_sapiens 0 254
ENST00000503722 RP11-77P16.3-001 unprocessed_pseudogene Homo_sapiens 0 259
ENST00000513501 AC226119.4-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 254
ENST00000531603 RP11-655M14.4-001 unprocessed_pseudogene Homo_sapiens 0 263

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