C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MpV17 mitochondrial inner membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154241 Mpv17-001 ENSMUSG00000090262 10090 - 5:31140660-31154251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000154241
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000154241 39.217±4.83 56.555±11.05 34.769±3.26 33.210±7.05 19.228±2.60 31.802±1.94 43.716±2.83 19.842±6.18 32.702±3.69 7.470±2.00 31.045±10.03 20.995±12.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EC CIL_0000EC_0002 CGP 5:31138063-31154251
CIL_0001DI CIL_0001DI_0002 CGP 5:31140660-31179911

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000002 IEA mitochondrial genome maintenance
GO:0005739 IMP mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0005777 IDA peroxisome
GO:0016021 IEA integral component of membrane
GO:0032836 IMP glomerular basement membrane development
GO:0034614 IMP cellular response to reactive oxygen species
GO:0042592 IEA homeostatic process
GO:0048839 IMP inner ear development
GO:0072593 IDA reactive oxygen species metabolic process
GO:2000377 IMP regulation of reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000233545 MPV17-001 protein_coding Homo_sapiens 0 734
ENST00000357186 MPV17-003 protein_coding Homo_sapiens 0 488
ENST00000380044 MPV17-002 protein_coding Homo_sapiens 0 739
ENST00000402310 MPV17-004 protein_coding Homo_sapiens 0 516
ENST00000402722 MPV17-007 protein_coding Homo_sapiens 0 342
ENST00000403262 MPV17-005 protein_coding Homo_sapiens 0 608
ENST00000405076 MPV17-015 protein_coding Homo_sapiens 0 267
ENST00000405983 MPV17-010 protein_coding Homo_sapiens 0 641
ENST00000415514 MPV17-012 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000426513 MPV17-008 nonsense_mediated_decay Homo_sapiens 0 604
ENST00000428910 MPV17-013 protein_coding Homo_sapiens 0 448
ENST00000430991 MPV17-011 protein_coding Homo_sapiens 0 267
ENST00000616446 MPV17-021 retained_intron Homo_sapiens 0 379
ENST00000616707 MPV17-023 retained_intron Homo_sapiens 3e-36 158
ENST00000617583 MPV17-017 retained_intron Homo_sapiens 0 477
ENST00000620797 MPV17-006 processed_transcript Homo_sapiens 0 270
ENST00000621183 MPV17-016 retained_intron Homo_sapiens 0 477
ENST00000621470 MPV17-009 retained_intron Homo_sapiens 0 342
ENST00000622003 MPV17-014 retained_intron Homo_sapiens 0 379

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