C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000EC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163794-ENSG00000115204 CGP 9606 2:27307400-27325680
GeneTranscriptPositionBiotype
ENSG00000115204 (MPV17)
MpV17 mitochondrial inner membrane protein 		ENST00000233545 (MPV17-001) 27309492-27322564 protein_coding
ENST00000357186 (MPV17-003) 27309494-27325680 protein_coding
ENST00000380044 (MPV17-002) 27309494-27323102 protein_coding
ENST00000399052 (MPV17-018) 27315716-27323097 protein_coding
ENST00000402310 (MPV17-004) 27309492-27323054 protein_coding
ENST00000402722 (MPV17-007) 27309530-27323081 protein_coding
ENST00000403262 (MPV17-005) 27311495-27323067 protein_coding
ENST00000405076 (MPV17-015) 27309707-27323102 protein_coding
ENST00000405983 (MPV17-010) 27309646-27323063 protein_coding
ENST00000415514 (MPV17-012) 27309904-27323063 nonsense_mediated_decay
ENST00000426513 (MPV17-008) 27309540-27323083 nonsense_mediated_decay
ENST00000428910 (MPV17-013) 27311935-27323072 protein_coding
ENST00000430991 (MPV17-011) 27309795-27313109 protein_coding
ENST00000475085 (MPV17-022) 27312147-27312986 retained_intron
ENST00000486898 (MPV17-019) 27316791-27323097 retained_intron
ENST00000494436 (MPV17-020) 27321959-27323077 retained_intron
ENST00000616446 (MPV17-021) 27312300-27313156 retained_intron
ENST00000616707 (MPV17-023) 27311073-27313387 retained_intron
ENST00000617583 (MPV17-017) 27311930-27323072 retained_intron
ENST00000620797 (MPV17-006) 27309492-27312453 processed_transcript
ENST00000621183 (MPV17-016) 27309850-27323102 retained_intron
ENST00000621470 (MPV17-009) 27312214-27323097 retained_intron
ENST00000622003 (MPV17-014) 27312248-27323062 retained_intron
ENSG00000138100 (TRIM54)
tripartite motif containing 54 		ENST00000296098 (TRIM54-001) 27282462-27307439 protein_coding
ENST00000380075 (TRIM54-002) 27282392-27307435 protein_coding
ENST00000485306 (TRIM54-004) 27305185-27306261 retained_intron
ENST00000488321 (TRIM54-003) 27304691-27305779 retained_intron
ENSG00000163794 (UCN)
urocortin 		ENST00000296099 (UCN-001) 27307400-27308445 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0000EC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038676-ENSMUSG00000090262 CGP 10090 5:31138063-31154251
GeneTranscriptPositionBiotype
ENSMUSG00000038676 (Ucn)
urocortin 		ENSMUST00000043475 (Ucn-001) 31138063-31138829 protein_coding
ENSMUSG00000090262 (Mpv17)
MpV17 mitochondrial inner membrane protein 		ENSMUST00000067186 (Mpv17-009) 31141096-31154193 protein_coding
ENSMUST00000114631 (Mpv17-010) 31141541-31154192 protein_coding
ENSMUST00000114632 (Mpv17-005) 31141516-31154152 protein_coding
ENSMUST00000130452 (Mpv17-012) 31145040-31154218 retained_intron
ENSMUST00000131391 (Mpv17-011) 31140663-31154222 protein_coding
ENSMUST00000137165 (Mpv17-006) 31144274-31154221 protein_coding
ENSMUST00000137409 (Mpv17-003) 31144074-31154218 nonsense_mediated_decay
ENSMUST00000141823 (Mpv17-002) 31141458-31154228 protein_coding
ENSMUST00000149113 (Mpv17-008) 31141711-31146060 retained_intron
ENSMUST00000150408 (Mpv17-007) 31145276-31153742 retained_intron
ENSMUST00000154241 (Mpv17-001) 31140660-31154251 protein_coding
ENSMUSG00000101678 (GTF3C2)
predicted gene 29609 		ENSMUST00000101411 (GTF3C2-001) 31151142-31179911 protein_coding
ENSMUST00000136581 (GTF3C2-002) 31144739-31158153 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000EC_0001ENSG00000115204ENST00000233545ENST00000357186ENST00000380044ENST00000399052ENST00000402310ENST00000402722ENST00000403262ENST00000405076ENST00000405983ENST00000415514ENST00000426513ENST00000428910ENST00000430991ENST00000475085ENST00000486898ENST00000494436ENST00000616446ENST00000616707ENST00000617583ENST00000620797ENST00000621183ENST00000621470ENST00000622003ENSG00000138100ENST00000296098ENST00000380075ENST00000485306ENST00000488321ENSG00000163794ENST00000296099CIL_0000EC_0002ENSMUSG00000038676ENSMUST00000043475ENSMUSG00000090262ENSMUST00000067186ENSMUST00000114631ENSMUST00000114632ENSMUST00000130452ENSMUST00000131391ENSMUST00000137165ENSMUST00000137409ENSMUST00000141823ENSMUST00000149113ENSMUST00000150408ENSMUST00000154241ENSMUSG00000101678ENSMUST00000101411ENSMUST00000136581
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000EC_0001ENSG00000115204ENST00000233545ENST00000357186ENST00000380044ENST00000402722ENST00000405983ENST00000426513ENST00000428910ENST00000430991ENST00000494436ENST00000616446ENST00000616707ENST00000620797ENST00000621183ENST00000622003ENSG00000138100ENST00000296098ENST00000380075ENST00000485306ENST00000488321ENSG00000163794ENST00000296099CIL_0000EC_0002ENSMUSG00000038676ENSMUST00000043475ENSMUSG00000090262ENSMUST00000067186ENSMUST00000114632ENSMUST00000131391ENSMUST00000141823ENSMUST00000154241ENSMUSG00000101678ENSMUST00000101411
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115204 ENST00000233545 N/A N/A N/A N/A N/A N/A 1.253±0.00 N/A N/A N/A N/A N/A 13.565±0.00 N/A
ENST00000357186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.969±0.00
ENST00000380044 16.990±0.00 32.287±0.00 N/A 16.430±9.67 19.815±0.00 7.206±3.86 19.899±0.00 18.391±17.38 7.843±2.28 11.718±8.41 N/A 31.404±14.59 25.420±9.01 9.437±5.13
ENST00000399052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000402722 N/A N/A N/A N/A 2.164±0.00 N/A N/A N/A N/A 3.386±1.67 1.623±0.00 N/A N/A N/A
ENST00000403262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405983 N/A N/A N/A 8.531±0.00 7.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.459±0.00
ENST00000415514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426513 4.751±0.00 12.724±0.00 N/A 3.250±0.00 N/A 11.039±0.00 N/A N/A N/A N/A 2.956±0.00 6.325±4.49 14.152±0.00 7.070±2.19
ENST00000428910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.203±0.00 N/A N/A
ENST00000430991 N/A N/A N/A N/A N/A 2.120±0.00 N/A N/A N/A N/A N/A 1.801±0.00 N/A N/A
ENST00000475085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494436 N/A N/A N/A N/A N/A N/A N/A N/A 3.140±0.00 N/A N/A 1.204±0.00 N/A N/A
ENST00000616446 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.976±0.00 N/A N/A N/A
ENST00000616707 N/A N/A 0.248±0.00 N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A N/A N/A 1.153±0.00
ENST00000617583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620797 N/A N/A 1.934±0.00 6.736±0.00 4.257±0.00 N/A 1.332±0.00 1.978±0.00 3.652±0.00 N/A 3.300±0.00 2.057±0.00 N/A N/A
ENST00000621183 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.491±0.00 N/A N/A N/A N/A
ENST00000621470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622003 N/A N/A N/A N/A N/A N/A N/A N/A 1.971±0.00 N/A N/A N/A N/A N/A
ENSG00000138100 ENST00000296098 0.070±0.00 0.243±0.00 N/A 0.486±0.00 1.464±0.00 0.128±0.00 N/A 0.293±0.00 N/A N/A N/A 0.041±0.00 0.031±0.00 2.284±0.00
ENST00000380075 N/A N/A N/A 0.207±0.00 3.084±2.55 N/A 42.864±30.03 1.027±0.00 N/A 0.275±0.00 85.273±49.30 0.148±0.00 0.249±0.20 7.322±0.15
ENST00000485306 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A
ENST00000488321 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A N/A 0.099±0.00 N/A
ENSG00000163794 ENST00000296099 0.100±0.00 0.424±0.00 0.131±0.00 1.381±0.89 N/A 1.062±0.00 N/A 0.850±0.00 1.137±0.00 1.128±0.00 N/A 0.923±0.18 0.866±0.32 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038676 ENSMUST00000043475 N/A N/A N/A 0.520±0.46 N/A N/A 0.876±0.29 0.066±0.00 0.025±0.00 N/A 1.808±0.72 0.144±0.00 0.118±0.12 0.615±0.13
ENSMUSG00000090262 ENSMUST00000067186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.819±0.00 N/A 15.363±0.00 N/A
ENSMUST00000114631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114632 56.904±14.27 53.213±0.00 N/A N/A 59.399±27.01 N/A 50.177±1.40 55.518±9.35 26.705±4.41 37.322±1.58 N/A 54.261±7.33 N/A N/A
ENSMUST00000130452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131391 N/A N/A N/A 9.288±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 6.748±0.00 N/A
ENSMUST00000137165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141823 N/A 50.426±1.35 N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.904±4.06 N/A N/A
ENSMUST00000149113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154241 39.217±4.83 56.555±11.05 34.769±3.26 N/A 33.210±7.05 19.228±2.60 31.802±1.94 43.716±2.83 19.842±6.18 32.702±3.69 7.470±2.00 31.045±10.03 20.995±12.34 N/A
ENSMUSG00000101678 ENSMUST00000101411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.165±0.00
ENSMUST00000136581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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