C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MpV17 mitochondrial inner membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380044 MPV17-002 ENSG00000115204 9606 - 2:27309494-27323102 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000380044
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000380044 16.990±0.00 32.287±0.00 16.430±9.67 19.815±0.00 7.206±3.86 19.899±0.00 18.391±17.38 7.843±2.28 11.718±8.41 31.404±14.59 25.420±9.01 9.437±5.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EC CIL_0000EC_0001 CGP 2:27307400-27325680
CIL_0001DI CIL_0001DI_0001 CGP 2:27309492-27357034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000002 IMP mitochondrial genome maintenance
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0005777 NAS peroxisome
GO:0016021 IEA integral component of membrane
GO:0032836 ISS glomerular basement membrane development
GO:0034614 ISS cellular response to reactive oxygen species
GO:0042592 IMP homeostatic process
GO:0048839 ISS inner ear development
GO:0072593 IEA reactive oxygen species metabolic process
GO:2000377 ISS regulation of reactive oxygen species metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000154241 Mpv17-001 protein_coding Mus_musculus 0 739
ENSMUST00000114632 Mpv17-005 protein_coding Mus_musculus 0 734
ENSMUST00000114631 Mpv17-010 protein_coding Mus_musculus 0 730
ENSMUST00000141823 Mpv17-002 protein_coding Mus_musculus 0 712
ENSMUST00000137165 Mpv17-006 protein_coding Mus_musculus 0 614
ENSMUST00000130452 Mpv17-012 retained_intron Mus_musculus 0 520
ENSMUST00000137409 Mpv17-003 nonsense_mediated_decay Mus_musculus 0 520
ENSMUST00000067186 Mpv17-009 protein_coding Mus_musculus 0 520
ENSMUST00000149113 Mpv17-008 retained_intron Mus_musculus 0 488
ENSMUST00000131391 Mpv17-011 protein_coding Mus_musculus 0 475
ENSMUST00000150408 Mpv17-007 retained_intron Mus_musculus 0 468
ENSMUST00000136581 GTF3C2-002 processed_transcript Mus_musculus 0 390

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