C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ras homolog gene family, member T1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154362 Rhot1-006 ENSMUSG00000017686 10090 + 11:80209113-80252037 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VO CIL_0000VO_0002 CGP 11:80209019-80355955

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000333942 RHOT1-001 protein_coding Homo_sapiens 0 1046
ENST00000354266 RHOT1-004 protein_coding Homo_sapiens 0 1046
ENST00000358365 RHOT1-002 protein_coding Homo_sapiens 0 1046
ENST00000366423 RHOT1P2-001 processed_pseudogene Homo_sapiens 0 499
ENST00000394692 RHOT1-008 protein_coding Homo_sapiens 0 1046
ENST00000436571 RHOT1P3-001 processed_pseudogene Homo_sapiens 0 492
ENST00000545287 RHOT1-015 protein_coding Homo_sapiens 0 1046
ENST00000578205 RHOT1-007 nonsense_mediated_decay Homo_sapiens 0 1046
ENST00000580392 RHOT1-012 protein_coding Homo_sapiens 0.00000002 64
ENST00000580976 RHOT1-010 processed_transcript Homo_sapiens 0 556
ENST00000581031 RHOT1-005 nonsense_mediated_decay Homo_sapiens 0 1046
ENST00000581094 RHOT1-006 protein_coding Homo_sapiens 0 1046
ENST00000581567 RHOT1-011 retained_intron Homo_sapiens 2e-28 130
ENST00000582468 RHOT1P1-001 processed_pseudogene Homo_sapiens 0 472
ENST00000582602 RHOT1-018 protein_coding Homo_sapiens 0 204
ENST00000583994 RHOT1-003 nonsense_mediated_decay Homo_sapiens 0 1046

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