C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MRV integration site 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154466 Mrvi1-005 ENSMUSG00000005611 10090 - 7:110926385-110982204 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004IK CIL_0004IK_0002 CGP 7:110850607-110982461
CIL_0004JB CIL_0004JB_0002 CGP 7:110868266-111056377

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0019934 IMP cGMP-mediated signaling
GO:0045986 IMP negative regulation of smooth muscle contraction
GO:0060087 IMP relaxation of vascular smooth muscle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000423302 MRVI1-001 protein_coding Homo_sapiens 0 623
ENST00000424001 MRVI1-201 protein_coding Homo_sapiens 0 259
ENST00000526414 MRVI1-003 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000527509 MRVI1-014 protein_coding Homo_sapiens 0 333
ENST00000529448 MRVI1-004 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000529547 MRVI1-008 protein_coding Homo_sapiens 0 230
ENST00000531107 MRVI1-002 protein_coding Homo_sapiens 0 464
ENST00000531308 MRVI1-007 nonsense_mediated_decay Homo_sapiens 2e-32 143
ENST00000531786 MRVI1-006 processed_transcript Homo_sapiens 0 342
ENST00000532037 MRVI1-011 processed_transcript Homo_sapiens 0 259
ENST00000533631 MRVI1-010 nonsense_mediated_decay Homo_sapiens 0 274
ENST00000534266 MRVI1-005 protein_coding Homo_sapiens 0 455
ENST00000541483 MRVI1-013 protein_coding Homo_sapiens 0 603
ENST00000547195 MRVI1-202 protein_coding Homo_sapiens 0 333
ENST00000558540 MRVI1-015 protein_coding Homo_sapiens 0 259

Loading