C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: murine retrovirus integration site 1 homolog
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424001 MRVI1-201 ENSG00000072952 9606 - 11:10573091-10652185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000424001
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000424001 21.594±0.00 6.641±0.00 1.928±0.00 9.757±0.00 1.929±0.00 0.013±0.00 0.253±0.00 4.622±0.00 2.334±0.00 4.233±1.77 3.071±1.53 19.748±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J9 CIL_0004J9_0001 CGP 11:10511678-10611689
CIL_0004IK CIL_0004IK_0001 CGP 11:10556966-10693988
CIL_0004JB CIL_0004JB_0001 CGP 11:10573091-10779743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0007596 TAS blood coagulation
GO:0016021 IEA integral component of membrane
GO:0016529 IEA sarcoplasmic reticulum
GO:0031095 TAS platelet dense tubular network membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125758 Mrvi1-002 protein_coding Mus_musculus 0 2353
ENSMUST00000005751 Mrvi1-001 protein_coding Mus_musculus 0 2353
ENSMUST00000127935 Mrvi1-004 protein_coding Mus_musculus 0 2001
ENSMUST00000142368 Mrvi1-003 protein_coding Mus_musculus 0 616
ENSMUST00000154466 Mrvi1-005 protein_coding Mus_musculus 0 259
ENSMUST00000135590 Mrvi1-006 retained_intron Mus_musculus 0 257

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