C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein, transmembrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000154786 Rnft2-004 ENSMUSG00000032850 10090 - 5:118234156-118244994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLungMuscleOvaryPlacentaENSMUST00000154786
Transcript ID Adrenal Brain Kidney Lung Muscle Ovary Placenta
ENSMUST00000154786 1.574±0.23 30.396±0.00 0.678±0.09 0.615±0.00 0.495±0.00 1.855±0.12 2.525±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YS CIL_0004YS_0002 CGP 5:118190736-118266093

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257575 RNFT2-001 protein_coding Homo_sapiens 0 701
ENST00000319176 RNFT2-004 protein_coding Homo_sapiens 0 701
ENST00000392549 RNFT2-201 protein_coding Homo_sapiens 0 701
ENST00000407967 RNFT2-002 protein_coding Homo_sapiens 0 701
ENST00000547718 RNFT2-003 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000622220 RNFT2-202 protein_coding Homo_sapiens 0 701

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