C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and SCAN domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541040 ZSCAN2-008 ENSG00000176371 9606 + 15:84603901-84623636 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000541040
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000541040 2.741±0.00 2.940±0.00 0.858±0.00 0.214±0.00 2.101±0.00 1.397±0.00 1.894±0.00 0.433±0.07 3.025±0.00 2.884±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HN CIL_0001HN_0001 CGP 15:84600986-84654343

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000147125 Zscan2-004 protein_coding Mus_musculus 0 523
ENSMUST00000044115 Zscan2-001 protein_coding Mus_musculus 0 523
ENSMUST00000155128 Zscan2-003 protein_coding Mus_musculus 0 518
ENSMUST00000132163 Zscan2-002 protein_coding Mus_musculus 0 459

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