C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Luc7 homolog (S. cerevisiae)-like | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000155151  |
Luc7l-006 |
ENSMUSG00000024188 |
10090 | + |
17:26253222-26266393  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008KN | CIL_0008KN_0002 | VISTA | 17:26208852-26810691 |
| CIL_0002RY | CIL_0002RY_0002 | CGP | 17:26211822-26285504 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003729 | IEA | mRNA binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005685 | IEA | U1 snRNP |
| GO:0006376 | IEA | mRNA splice site selection |
| GO:0045843 | IDA | negative regulation of striated muscle tissue development |
| GO:0050733 | IPI | RS domain binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000293872
|
LUC7L-003 | protein_coding | Homo_sapiens | 0 | 466 |
|
ENST00000337351
|
LUC7L-001 | protein_coding | Homo_sapiens | 0 | 466 |
|
ENST00000397780
|
LUC7L-007 | protein_coding | Homo_sapiens | 0 | 468 |
|
ENST00000397783
|
LUC7L-002 | protein_coding | Homo_sapiens | 0 | 466 |
|
ENST00000418978
|
LUC7L-009 | nonsense_mediated_decay | Homo_sapiens | 0 | 333 |
|
ENST00000419516
|
LUC7L-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 464 |
|
ENST00000426094
|
LUC7L-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 466 |
|
ENST00000428363
|
LUC7L-020 | protein_coding | Homo_sapiens | 0 | 331 |
|
ENST00000443357
|
LUC7L-012 | protein_coding | Homo_sapiens | 0 | 337 |
|
ENST00000469109
|
LUC7L-013 | retained_intron | Homo_sapiens | 0 | 337 |
|
ENST00000490762
|
LUC7L-005 | retained_intron | Homo_sapiens | 0 | 468 |
|
ENST00000494366
|
LUC7L-010 | processed_transcript | Homo_sapiens | 0 | 435 |
