C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002RY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071449-ENSDARG00000055903 CGP 7955 24:41189117-41227091
GeneTranscriptPositionBiotype
ENSDARG00000055903 (luc7l)
LUC7-like (S. cerevisiae) 		ENSDART00000045273 (luc7l-201) 41215070-41227089 protein_coding
ENSDART00000078313 (luc7l-001) 41211514-41227091 protein_coding
ENSDART00000133284 (luc7l-003) 41211548-41220030 processed_transcript
ENSDART00000137218 (luc7l-005) 41211544-41219728 nonsense_mediated_decay
ENSDART00000137684 (luc7l-004) 41211514-41214822 processed_transcript
ENSDART00000142182 (luc7l-002) 41214950-41227091 protein_coding
ENSDARG00000071449 (ITFG3)
integrin alpha FG-GAP repeat containing 3 		ENSDART00000105646 (ITFG3-201) 41189117-41206183 protein_coding
ENSDART00000142522 (ITFG3-001) 41193420-41210377 protein_coding
ENSDART00000147080 (ITFG3-002) 41200579-41206222 processed_transcript
ENSDARG00000097061 (si:dkey-161j23.9)
si:dkey-161j23.9 		ENSDART00000154873 (si:dkey-161j23.9-001) 41198123-41206765 antisense
CIL_0002RY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024187-ENSMUSG00000024188 CGP 10090 17:26211822-26285504
GeneTranscriptPositionBiotype
ENSMUSG00000024187 (Itfg3)
integrin alpha FG-GAP repeat containing 3 		ENSMUST00000114988 (Itfg3-001) 26211822-26244223 protein_coding
ENSMUST00000118487 (Itfg3-002) 26212713-26244141 protein_coding
ENSMUST00000141240 (Itfg3-004) 26213544-26216234 protein_coding
ENSMUST00000151293 (Itfg3-005) 26218279-26220580 protein_coding
ENSMUST00000153582 (Itfg3-003) 26215207-26216958 retained_intron
ENSMUSG00000024188 (Luc7l)
Luc7 homolog (S. cerevisiae)-like 		ENSMUST00000025023 (Luc7l-002) 26252910-26280719 protein_coding
ENSMUST00000114976 (Luc7l-003) 26252951-26285504 protein_coding
ENSMUST00000119928 (Luc7l-008) 26252966-26281990 protein_coding
ENSMUST00000129226 (Luc7l-007) 26253385-26254252 processed_transcript
ENSMUST00000133032 (Luc7l-004) 26252984-26280720 retained_intron
ENSMUST00000140427 (Luc7l-010) 26252956-26277634 protein_coding
ENSMUST00000148894 (Luc7l-001) 26252999-26280723 nonsense_mediated_decay
ENSMUST00000152107 (Luc7l-009) 26267275-26281968 protein_coding
ENSMUST00000154235 (Luc7l-005) 26252966-26281992 nonsense_mediated_decay
ENSMUST00000155151 (Luc7l-006) 26253222-26266393 protein_coding
ENSMUSG00000088273 (Gm23123)
predicted gene, 23123 		ENSMUST00000157648 (Gm23123-201) 26223502-26223645 snoRNA
ENSMUSG00000089764 (Gm16580)
predicted gene 16580 		ENSMUST00000162696 (Gm16580-001) 26269336-26270379 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RY_0001ENSDARG00000055903ENSDART00000045273ENSDART00000078313ENSDART00000133284ENSDART00000137218ENSDART00000137684ENSDART00000142182ENSDARG00000071449ENSDART00000105646ENSDART00000142522ENSDART00000147080ENSDARG00000097061ENSDART00000154873CIL_0002RY_0002ENSMUSG00000024187ENSMUST00000114988ENSMUST00000118487ENSMUST00000141240ENSMUST00000151293ENSMUST00000153582ENSMUSG00000024188ENSMUST00000025023ENSMUST00000114976ENSMUST00000119928ENSMUST00000129226ENSMUST00000133032ENSMUST00000140427ENSMUST00000148894ENSMUST00000152107ENSMUST00000154235ENSMUST00000155151ENSMUSG00000088273ENSMUST00000157648ENSMUSG00000089764ENSMUST00000162696
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002RY_0001ENSDARG00000055903ENSDART00000045273ENSDART00000078313ENSDART00000137684ENSDART00000142182ENSDARG00000071449ENSDART00000105646ENSDARG00000097061ENSDART00000154873CIL_0002RY_0002ENSMUSG00000024187ENSMUST00000114988ENSMUST00000118487ENSMUST00000151293ENSMUSG00000024188ENSMUST00000025023ENSMUST00000114976ENSMUST00000119928ENSMUST00000133032ENSMUST00000140427ENSMUST00000148894ENSMUST00000154235ENSMUSG00000088273ENSMUST00000157648ENSMUSG00000089764ENSMUST00000162696
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000055903 ENSDART00000045273 N/A N/A N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000078313 N/A N/A N/A 32.343±1.06 N/A N/A 11.834±7.27 6.526±0.00 2.188±0.00 N/A 7.170±0.00 N/A N/A N/A
ENSDART00000133284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000137684 N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000142182 N/A N/A N/A 8.708±1.36 N/A N/A 4.511±2.85 3.106±2.10 N/A N/A N/A N/A N/A N/A
ENSDARG00000071449 ENSDART00000105646 N/A N/A N/A N/A N/A N/A 4.706±0.83 3.537±0.28 N/A N/A N/A N/A N/A N/A
ENSDART00000142522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097061 ENSDART00000154873 N/A N/A N/A N/A N/A N/A N/A N/A 0.370±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024187 ENSMUST00000114988 5.307±1.09 8.568±3.05 3.517±0.11 1.363±0.00 4.501±1.31 19.099±1.85 3.805±0.53 4.350±0.81 2.728±1.15 4.467±0.91 1.455±0.17 7.163±1.86 8.587±7.34 2.716±0.27
ENSMUST00000118487 31.367±17.80 28.877±14.76 31.714±4.62 7.567±2.92 16.116±5.27 73.311±7.58 17.509±1.81 30.569±4.02 8.240±4.24 11.494±2.54 10.758±1.84 27.470±10.18 24.891±27.17 14.784±6.84
ENSMUST00000141240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151293 N/A N/A N/A 16.522±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 119.845±69.83 31.661±0.00
ENSMUST00000153582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024188 ENSMUST00000025023 7.739±0.46 9.779±1.31 N/A N/A 4.975±0.55 5.660±0.69 N/A 5.281±1.03 6.085±1.36 5.218±0.04 1.921±0.31 13.721±3.16 8.239±2.93 4.511±0.84
ENSMUST00000114976 2.792±0.00 N/A 7.468±1.59 12.052±3.65 5.804±0.00 N/A 1.054±0.00 N/A 3.986±2.00 1.687±0.00 1.342±0.52 4.981±1.19 3.820±1.28 N/A
ENSMUST00000119928 N/A N/A N/A 20.837±0.00 N/A N/A N/A N/A N/A N/A N/A 24.297±0.00 15.735±3.51 10.122±0.00
ENSMUST00000129226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133032 5.363±0.00 N/A 7.496±2.14 8.660±0.00 4.058±0.10 N/A 2.991±0.64 1.919±0.00 4.757±2.10 N/A 1.674±0.51 12.439±0.49 5.061±2.71 N/A
ENSMUST00000140427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 84.983±0.00 38.312±12.17 34.780±0.00
ENSMUST00000148894 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.026±0.25 12.333±0.00 5.660±1.12 N/A
ENSMUST00000152107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154235 N/A 12.030±6.90 N/A N/A 2.617±0.00 1.852±0.04 N/A N/A 2.975±1.12 3.082±0.00 0.985±0.00 5.498±1.59 3.476±0.64 N/A
ENSMUST00000155151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088273 ENSMUST00000157648 N/A N/A N/A 4.358±0.00 N/A N/A N/A N/A 59.557±8.11 N/A N/A N/A 2.852±0.00 N/A
ENSMUSG00000089764 ENSMUST00000162696 2.348±0.25 0.763±0.30 2.629±2.22 0.781±0.63 2.105±0.54 1.196±0.26 0.419±0.18 0.822±0.33 1.204±1.27 0.873±0.14 0.123±0.06 2.577±2.00 0.377±0.33 3.519±1.70

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