C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000155527 Cdh8-004 ENSMUSG00000036510 10090 - 8:99024471-99416427 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryENSMUST00000155527
Transcript ID Brain Ovary
ENSMUST00000155527 1.218±0.00 0.060±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007268 IMP synaptic transmission
GO:0009409 IMP response to cold
GO:0016021 IEA integral component of membrane
GO:0035249 IMP synaptic transmission, glutamatergic
GO:0043083 IDA synaptic cleft
GO:0043679 IDA axon terminus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000131097 BX957322.2-201 protein_coding Danio_rerio 0.00002 57
ENST00000299345 CDH8-013 protein_coding Homo_sapiens 0 3260
ENST00000577390 CDH8-001 protein_coding Homo_sapiens 0 3206
ENST00000577730 CDH8-012 protein_coding Homo_sapiens 0 2974
ENST00000582242 CDH8-007 retained_intron Homo_sapiens 0 342
ENST00000583382 CDH8-011 protein_coding Homo_sapiens 0 1877
ENST00000583483 CDH8-010 processed_transcript Homo_sapiens 0 324
ENST00000584337 CDH8-003 protein_coding Homo_sapiens 0 2392
ENST00000584506 CDH8-002 protein_coding Homo_sapiens 0 520
ENST00000584966 CDH8-005 retained_intron Homo_sapiens 0 667
ENST00000585315 CDH8-014 nonsense_mediated_decay Homo_sapiens 0 2100

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