C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 78, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156025 Fam78b-004 ENSMUSG00000060568 10090 + 1:167001432-167089077 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungMusclePlacentaTestisENSMUST00000156025
Transcript ID Brain Breast Colon Lung Muscle Placenta Testis
ENSMUST00000156025 2.006±0.00 0.693±0.00 0.342±0.14 0.488±0.00 0.345±0.17 2.493±0.61 0.003±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000091431 FAM78B (1 of 2)-201 protein_coding Danio_rerio 0 375
ENST00000247295 FAM78A-003 processed_transcript Homo_sapiens 0 270
ENST00000338353 FAM78B-201 protein_coding Homo_sapiens 0 1729
ENST00000354422 FAM78B-001 protein_coding Homo_sapiens 0 1731
ENST00000372269 FAM78A-002 protein_coding Homo_sapiens 0 270
ENST00000372271 FAM78A-001 protein_coding Homo_sapiens 0 377
ENST00000435676 FAM78B-002 nonsense_mediated_decay Homo_sapiens 0 1892
ENST00000441649 FAM78B-003 nonsense_mediated_decay Homo_sapiens 0 1786
ENST00000456900 FAM78B-004 nonsense_mediated_decay Homo_sapiens 0 2134
ENST00000464831 FAM78A-004 protein_coding Homo_sapiens 0 270

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