C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lymphocyte antigen 6 complex, locus H
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156032 Ly6h-005 ENSMUSG00000022577 10090 - 15:75565026-75567216 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000156032
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000156032 2.145±0.43 281.514±0.00 1.287±0.66 0.420±0.08 0.066±0.01 0.148±0.04 0.235±0.02 0.389±0.00 6.423±4.10 0.558±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NV CIL_0002NV_0002 CGP 15:75449457-75567255
CIL_0008C2 CIL_0008C2_0002 VISTA 15:75534812-76135772
CIL_0002NW CIL_0002NW_0002 CGP 15:75551268-75599481

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342752 LY6H-001 protein_coding Homo_sapiens 0 708
ENST00000414417 LY6H-002 protein_coding Homo_sapiens 0 808
ENST00000430474 LY6H-003 protein_coding Homo_sapiens 0 617
ENST00000479685 LY6H-004 retained_intron Homo_sapiens 0 505
ENST00000610554 LY6H-202 protein_coding Homo_sapiens 0 617
ENST00000615409 LY6H-201 protein_coding Homo_sapiens 0 782
ENST00000615434 LY6H-203 protein_coding Homo_sapiens 0 782

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