C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, alpha 1F subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156047 Cacna1f-008 ENSMUSG00000031142 10090 + X:7627194-7630499 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V1 CIL_0003V1_0002 CGP X:7607083-7653256

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005245 IMP voltage-gated calcium channel activity
GO:0005886 IBA plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006874 IMP cellular calcium ion homeostasis
GO:0007409 IMP axonogenesis
GO:0007601 IMP visual perception
GO:0008331 IBA high voltage-gated calcium channel activity
GO:0034765 IEA regulation of ion transmembrane transport
GO:0048813 IMP dendrite morphogenesis
GO:0060041 IMP retina development in camera-type eye
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323022 CACNA1F-001 protein_coding Homo_sapiens 0 1044
ENST00000376251 CACNA1F-002 protein_coding Homo_sapiens 0 1044
ENST00000376265 CACNA1F-007 protein_coding Homo_sapiens 0 1044
ENST00000481035 CACNA1F-004 retained_intron Homo_sapiens 0 237

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