C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | tropomodulin 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000156200  |
Tmod1-002 |
ENSMUSG00000028328 |
10090 | + |
4:46039209-46090897  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00086Q | CIL_00086Q_0002 | VISTA | 4:45528456-46131469 |
| CIL_0007HJ | CIL_0007HJ_0003 | CGP | 4:45965334-46116032 |
| CIL_0002JE | CIL_0002JE_0002 | CGP | 4:46038935-46138694 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005523 | IDA | tropomyosin binding |
| GO:0005856 | TAS | cytoskeleton |
| GO:0006936 | IMP | muscle contraction |
| GO:0008344 | IMP | adult locomotory behavior |
| GO:0016020 | IDA | membrane |
| GO:0030016 | IDA | myofibril |
| GO:0030239 | IMP | myofibril assembly |
| GO:0030863 | IDA | cortical cytoskeleton |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000259365
|
TMOD1-001 | protein_coding | Homo_sapiens | 0 | 444 |
|
ENST00000395211
|
TMOD1-201 | protein_coding | Homo_sapiens | 0 | 444 |
