C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: wingless-type MMTV integration site family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156317 Wnt2-002 ENSMUSG00000010797 10090 - 6:17989215-18030410 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000156317
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000156317 0.355±0.00 0.249±0.16 12.554±1.38 0.686±0.57 2.007±0.76 0.322±0.07 0.152±0.04 0.129±0.05 0.620±0.35 2.903±1.28 0.062±0.02 0.256±0.21 1.219±0.61 0.441±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QW CIL_0003QW_0002 CGP 6:17692933-18030585
CIL_00063S CIL_00063S_0003 CGP 6:17988940-18109061

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002053 IMP positive regulation of mesenchymal cell proliferation
GO:0005109 IBA frizzled binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005615 IBA extracellular space
GO:0005737 ISO cytoplasm
GO:0016055 IGI Wnt signaling pathway
GO:0030182 IBA neuron differentiation
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0055009 IMP atrial cardiac muscle tissue morphogenesis
GO:0060045 IMP positive regulation of cardiac muscle cell proliferation
GO:0060070 IGI canonical Wnt signaling pathway
GO:0060317 IMP cardiac epithelial to mesenchymal transition
GO:0060492 IGI lung induction
GO:0060501 IMP positive regulation of epithelial cell proliferation involved in lung morphogenesis
GO:0060716 IMP labyrinthine layer blood vessel development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265441 WNT2-002 protein_coding Homo_sapiens 0 1112
ENST00000449446 WNT2-001 nonsense_mediated_decay Homo_sapiens 0 1753
ENST00000461427 WNT2-003 retained_intron Homo_sapiens 0 643
ENST00000491214 WNT2-004 protein_coding Homo_sapiens 0 538

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