C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Parkinson disease 7 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156353 Pddc1-002 ENSMUSG00000051007 10090 - 7:141408135-141414090 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000156353
Transcript ID Adipose Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000156353 3.932±0.00 3.986±0.94 3.062±1.18 3.150±0.04 1.626±0.14 1.914±0.24 3.354±0.33 0.370±0.07 2.670±0.34 1.625±0.34 1.399±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OK CIL_0003OK_0002 CGP 7:141392199-141414136
CIL_0003OJ CIL_0003OJ_0002 CGP 7:141408135-141429491

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319863 PDDC1-003 protein_coding Homo_sapiens 0 436
ENST00000397472 PDDC1-006 protein_coding Homo_sapiens 0 436
ENST00000526325 PDDC1-016 protein_coding Homo_sapiens 0 436
ENST00000526650 PDDC1-017 protein_coding Homo_sapiens 3e-40 169
ENST00000528309 PDDC1-012 protein_coding Homo_sapiens 0 219
ENST00000528602 PDDC1-008 retained_intron Homo_sapiens 0 448
ENST00000529966 PDDC1-018 processed_transcript Homo_sapiens 0 276
ENST00000532320 PDDC1-004 retained_intron Homo_sapiens 0 276
ENST00000532839 PDDC1-015 processed_transcript Homo_sapiens 0 276
ENST00000534603 PDDC1-005 nonsense_mediated_decay Homo_sapiens 0 448

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