C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EMI domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156492 Emid1-003 ENSMUSG00000034164 10090 - 11:5131975-5152237 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000156492
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000156492 5.669±4.97 7.650±2.90 2.901±0.00 6.152±2.37 9.230±2.00 0.812±0.16 4.011±0.41 0.560±0.30 9.555±2.60 8.410±3.10 2.252±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MN CIL_0004MN_0002 CGP 11:5098926-5152257

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334018 EMID1-003 protein_coding Homo_sapiens 0 507
ENST00000404755 EMID1-001 protein_coding Homo_sapiens 0 507
ENST00000404820 EMID1-002 protein_coding Homo_sapiens 0 507
ENST00000429226 EMID1-006 protein_coding Homo_sapiens 0 507
ENST00000430127 EMID1-005 protein_coding Homo_sapiens 0 372
ENST00000435427 EMID1-008 nonsense_mediated_decay Homo_sapiens 1e-29 134
ENST00000484039 EMID1-007 processed_transcript Homo_sapiens 1e-20 104

Loading