C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004MN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079816-ENSDARG00000076119 CGP 7955 5:26551568-26681363
GeneTranscriptPositionBiotype
ENSDARG00000079816 (rhbdd3)
rhomboid domain containing 3
ENSDART00000111302 (rhbdd3-001) 26551568-26555532 protein_coding
CIL_0004MN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034175-ENSMUSG00000034164 CGP 10090 11:5098926-5152257
GeneTranscriptPositionBiotype
ENSMUSG00000034164 (Emid1)
EMI domain containing 1
ENSMUST00000062821 (Emid1-001) 5106265-5152257 protein_coding
ENSMUST00000132196 (Emid1-006) 5106645-5129242 retained_intron
ENSMUST00000132328 (Emid1-002) 5106265-5130778 protein_coding
ENSMUST00000138551 (Emid1-007) 5135408-5150284 processed_transcript
ENSMUST00000151906 (Emid1-005) 5106271-5129480 protein_coding
ENSMUST00000153308 (Emid1-004) 5106907-5129063 nonsense_mediated_decay
ENSMUST00000156492 (Emid1-003) 5131975-5152237 nonsense_mediated_decay
ENSMUST00000163299 (Emid1-201) 5106266-5152240 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004MN_0001ENSDARG00000079816ENSDART00000111302CIL_0004MN_0002ENSMUSG00000034164ENSMUST00000062821ENSMUST00000132196ENSMUST00000132328ENSMUST00000138551ENSMUST00000151906ENSMUST00000153308ENSMUST00000156492ENSMUST00000163299
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004MN_0001ENSDARG00000079816ENSDART00000111302CIL_0004MN_0002ENSMUSG00000034164ENSMUST00000062821ENSMUST00000132328ENSMUST00000151906ENSMUST00000153308ENSMUST00000156492ENSMUST00000163299
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000079816 ENSDART00000111302 N/A N/A N/A 3.914±0.58 N/A N/A 0.975±0.52 1.551±0.00 0.165±0.00 N/A 0.462±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034164 ENSMUST00000062821 3.131±3.20 2.467±0.36 19.208±4.78 2.704±0.43 2.369±0.78 5.630±1.37 0.495±0.27 2.683±1.16 0.681±0.39 6.202±0.90 1.646±0.66 2.060±1.26 3.319±1.24 N/A
ENSMUST00000132196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132328 5.057±0.00 N/A 18.139±4.20 N/A 2.345±0.00 3.889±0.00 N/A 1.696±0.00 0.155±0.08 N/A 1.586±0.66 0.953±0.49 0.850±0.15 0.339±0.00
ENSMUST00000138551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151906 N/A N/A N/A N/A 0.620±0.00 N/A N/A N/A N/A N/A 2.419±1.03 2.025±0.00 N/A N/A
ENSMUST00000153308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.085±0.00
ENSMUST00000156492 5.669±4.97 7.650±2.90 N/A 2.901±0.00 6.152±2.37 9.230±2.00 0.812±0.16 4.011±0.41 0.560±0.30 9.555±2.60 N/A 8.410±3.10 2.252±0.00 N/A
ENSMUST00000163299 2.594±0.00 N/A N/A 1.367±0.00 0.703±0.00 1.764±0.00 N/A 0.985±0.03 0.089±0.05 2.386±0.00 2.568±0.00 1.246±0.58 0.626±0.00 N/A

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