C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EMI domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034164 Emid1 10090 - 11:5106265-5152257 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000062821 Emid1-001 5106265-5152257 protein_coding
  ENSMUST00000132196 Emid1-006 5106645-5129242 retained_intron
  ENSMUST00000132328 Emid1-002 5106265-5130778 protein_coding
  ENSMUST00000138551 Emid1-007 5135408-5150284 processed_transcript
  ENSMUST00000151906 Emid1-005 5106271-5129480 protein_coding
  ENSMUST00000153308 Emid1-004 5106907-5129063 nonsense_mediated_decay
  ENSMUST00000156492 Emid1-003 5131975-5152237 nonsense_mediated_decay
  ENSMUST00000163299 Emid1-201 5106266-5152240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000062821ENSMUST00000132328ENSMUST00000151906ENSMUST00000153308ENSMUST00000156492ENSMUST00000163299
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000062821 3.131±3.20 2.467±0.36 19.208±4.78 2.704±0.43 2.369±0.78 5.630±1.37 0.495±0.27 2.683±1.16 0.681±0.39 6.202±0.90 1.646±0.66 2.060±1.26 3.319±1.24 N/A
ENSMUST00000132328 5.057±0.00 N/A 18.139±4.20 N/A 2.345±0.00 3.889±0.00 N/A 1.696±0.00 0.155±0.08 N/A 1.586±0.66 0.953±0.49 0.850±0.15 0.339±0.00
ENSMUST00000151906 N/A N/A N/A N/A 0.620±0.00 N/A N/A N/A N/A N/A 2.419±1.03 2.025±0.00 N/A N/A
ENSMUST00000153308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.085±0.00
ENSMUST00000156492 5.669±4.97 7.650±2.90 N/A 2.901±0.00 6.152±2.37 9.230±2.00 0.812±0.16 4.011±0.41 0.560±0.30 9.555±2.60 N/A 8.410±3.10 2.252±0.00 N/A
ENSMUST00000163299 2.594±0.00 N/A N/A 1.367±0.00 0.703±0.00 1.764±0.00 N/A 0.985±0.03 0.089±0.05 2.386±0.00 2.568±0.00 1.246±0.58 0.626±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MN CIL_0004MN_0002 CGP 11:5098926-5152257

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005578 IDA proteinaceous extracellular matrix
GO:0005581 IEA collagen trimer
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076119 emid1 EMI domain containing 1 protein_coding Danio_rerio
ENSG00000186998 EMID1 EMI domain containing 1 protein_coding Homo_sapiens

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