C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PQ loop repeat containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000157056 Pqlc1-009 ENSMUSG00000034006 10090 + 18:80253342-80283385 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000157056
Transcript ID Placenta
ENSMUST00000157056 1.778±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0002 VISTA 18:80030119-80632361
CIL_0001P3 CIL_0001P3_0002 CGP 18:80253292-80364254

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351365 PQLC1-003 nonsense_mediated_decay Homo_sapiens 9e-37 159
ENST00000357575 PQLC1-009 protein_coding Homo_sapiens 0 475
ENST00000397778 PQLC1-001 protein_coding Homo_sapiens 1e-36 159
ENST00000466449 PQLC1-002 retained_intron Homo_sapiens 4e-36 158
ENST00000469369 PQLC1-007 processed_transcript Homo_sapiens 8e-37 158
ENST00000494607 PQLC1-005 processed_transcript Homo_sapiens 2e-37 159
ENST00000589000 PQLC1-013 processed_transcript Homo_sapiens 7e-37 158
ENST00000591964 PQLC1-011 nonsense_mediated_decay Homo_sapiens 1e-36 158

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