C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PQ loop repeat containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397778 PQLC1-001 ENSG00000122490 9606 - 18:79902420-79951664 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397778
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397778 17.620±0.00 8.457±0.00 5.778±3.77 13.554±0.00 3.273±0.00 3.466±0.00 6.437±0.00 11.756±10.83 12.604±0.00 5.224±2.27 6.310±3.86 7.218±2.45 7.296±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0001 VISTA 18:79552100-80156263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091798 Pqlc1-201 protein_coding Mus_musculus 0 869
ENSMUST00000140594 Pqlc1-005 protein_coding Mus_musculus 0 869
ENSMUST00000131780 Pqlc1-004 protein_coding Mus_musculus 0 869
ENSMUST00000070135 Pqlc1-003 protein_coding Mus_musculus 0 514
ENSMUST00000129043 Pqlc1-002 protein_coding Mus_musculus 0 514
ENSMUST00000123750 Pqlc1-001 protein_coding Mus_musculus 0 514
ENSMUST00000144468 Pqlc1-008 protein_coding Mus_musculus 0 294
ENSMUST00000157056 Pqlc1-009 protein_coding Mus_musculus 1e-36 159

Loading