C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: shisa family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159181 Shisa4-002 ENSMUSG00000041889 10090 - 1:135373888-135375077 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonKidneyLiverLungOvaryTestisENSMUST00000159181
Transcript ID Adipose Adrenal Bladder Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000159181 3.459±2.18 8.227±3.88 1.756±0.00 2.521±0.20 1.841±0.37 2.802±0.00 0.120±0.10 2.095±0.11 6.381±2.24 0.185±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262461 SLC12A2-001 protein_coding Homo_sapiens 0.00000002 68
ENST00000356387 ORAI2-201 protein_coding Homo_sapiens 0.00002 58
ENST00000362011 SHISA4-001 protein_coding Homo_sapiens 0 337
ENST00000368324 SYT11-001 protein_coding Homo_sapiens 0.000007 58
ENST00000407780 ICOSLG-001 protein_coding Homo_sapiens 0.0001 55
ENST00000464117 SHISA4-002 processed_transcript Homo_sapiens 0 250
ENST00000481699 SHISA4-003 processed_transcript Homo_sapiens 0 250
ENST00000611770 ORAI2-202 protein_coding Homo_sapiens 0.00002 58

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