C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: X-ray repair complementing defective repair in Chinese hamster cells 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159199 Xrcc4-002 ENSMUSG00000021615 10090 - 13:89774027-90089523 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0002328 IMP pro-B cell differentiation
GO:0003677 IEA DNA binding
GO:0005958 IDA DNA-dependent protein kinase-DNA ligase 4 complex
GO:0006266 IDA DNA ligation
GO:0006302 IMP double-strand break repair
GO:0006303 IMP double-strand break repair via nonhomologous end joining
GO:0007417 IMP central nervous system development
GO:0010165 IMP response to X-ray
GO:0010212 IMP response to ionizing radiation
GO:0010332 IMP response to gamma radiation
GO:0033077 IMP T cell differentiation in thymus
GO:0033151 IMP V(D)J recombination
GO:0033152 IMP immunoglobulin V(D)J recombination
GO:0043524 IMP negative regulation of neuron apoptotic process
GO:0045190 IMP isotype switching
GO:0048146 IMP positive regulation of fibroblast proliferation
GO:0050769 IMP positive regulation of neurogenesis
GO:0070419 ISS nonhomologous end joining complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282268 XRCC4-201 protein_coding Homo_sapiens 0 664
ENST00000338635 XRCC4-002 protein_coding Homo_sapiens 0 682
ENST00000396027 XRCC4-001 protein_coding Homo_sapiens 0 682
ENST00000509268 XRCC4-005 processed_transcript Homo_sapiens 0 664
ENST00000511817 XRCC4-003 protein_coding Homo_sapiens 0 664
ENST00000542685 XRCC4-004 processed_transcript Homo_sapiens 0 682

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