C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: X-ray repair complementing defective repair in Chinese hamster cells 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542685 XRCC4-004 ENSG00000152422 9606 + 5:83077557-83311069 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000542685
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000542685 0.898±0.00 0.883±0.00 0.048±0.00 0.973±0.00 0.577±0.00 0.300±0.09 0.150±0.00 0.610±0.32 0.235±0.00 0.948±0.28 0.267±0.09 1.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TL CIL_0005TL_0002 CGP 5:83052846-83353787

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022115 Xrcc4-001 protein_coding Mus_musculus 0 684
ENSMUST00000159199 Xrcc4-002 nonsense_mediated_decay Mus_musculus 0 682
ENSMUST00000160232 Xrcc4-003 protein_coding Mus_musculus 0 246
ENSMUST00000161396 Xrcc4-004 protein_coding Mus_musculus 0 237

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