C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 123
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159372 Rnf123-003 ENSMUSG00000041528 10090 - 9:108077722-108083344 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GV CIL_0007GV_0002 CGP 9:108002501-108052801
CIL_0005NE CIL_0005NE_0003 CGP 9:108051534-108083346

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327697 RNF123-001 protein_coding Homo_sapiens 8e-35 154
ENST00000442552 MST1L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0.00000002 66
ENST00000443204 RNF123-009 nonsense_mediated_decay Homo_sapiens 8e-36 154
ENST00000449682 MST1-001 protein_coding Homo_sapiens 0.000000000003 79
ENST00000454491 RNF123-008 protein_coding Homo_sapiens 3e-35 152
ENST00000457726 RNF123-003 nonsense_mediated_decay Homo_sapiens 8e-35 154
ENST00000457982 MST1P2-001 unprocessed_pseudogene Homo_sapiens 0.00000002 66
ENST00000479115 MST1-008 retained_intron Homo_sapiens 0.000000000002 79
ENST00000480268 MST1-020 retained_intron Homo_sapiens 0.0000000000007 79
ENST00000481930 MST1-013 retained_intron Homo_sapiens 0.0000000000006 79
ENST00000484269 MST1-018 retained_intron Homo_sapiens 0.000000000002 79
ENST00000486102 RNF123-005 retained_intron Homo_sapiens 8e-35 154
ENST00000487805 RNF123-006 retained_intron Homo_sapiens 1e-34 154
ENST00000488350 MST1-002 retained_intron Homo_sapiens 0.000000000004 79
ENST00000492329 MST1-009 retained_intron Homo_sapiens 0.000000000002 79
ENST00000494809 MST1-021 retained_intron Homo_sapiens 0.0000000000009 79
ENST00000497359 MST1-007 retained_intron Homo_sapiens 0.000000000002 79
ENST00000498021 MST1-012 retained_intron Homo_sapiens 0.0000000000009 79
ENST00000624762 MST1L-006 processed_transcript Homo_sapiens 0.00000003 66

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