C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Berardinelli-Seip congenital lipodystrophy 2 homolog (seipin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159571 Bscl2-003 ENSMUSG00000071657 10090 + 19:8839373-8848667 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0002 VISTA 19:8644197-9245760

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278893 BSCL2-008 protein_coding Homo_sapiens 0 673
ENST00000301781 BSCL2-002 nonsense_mediated_decay Homo_sapiens 0 887
ENST00000360796 BSCL2-003 protein_coding Homo_sapiens 0 782
ENST00000403550 BSCL2-006 protein_coding Homo_sapiens 0 673
ENST00000403734 HNRNPUL2-BSCL2-001 nonsense_mediated_decay Homo_sapiens 0 739
ENST00000405837 BSCL2-001 protein_coding Homo_sapiens 0 739
ENST00000407022 BSCL2-005 protein_coding Homo_sapiens 0 673
ENST00000412351 BSCL2-015 processed_transcript Homo_sapiens 9.94922e-44 180
ENST00000413908 BSCL2-010 nonsense_mediated_decay Homo_sapiens 6e-38 161
ENST00000421906 BSCL2-004 protein_coding Homo_sapiens 0 671
ENST00000448568 BSCL2-022 protein_coding Homo_sapiens 0 673
ENST00000449636 BSCL2-012 protein_coding Homo_sapiens 4e-29 132
ENST00000463679 BSCL2-011 retained_intron Homo_sapiens 0 202
ENST00000468505 BSCL2-013 retained_intron Homo_sapiens 0 475
ENST00000470529 BSCL2-014 retained_intron Homo_sapiens 0 202
ENST00000524862 BSCL2-020 protein_coding Homo_sapiens 0 739
ENST00000526426 BSCL2-028 processed_transcript Homo_sapiens 2.99878e-43 178
ENST00000531524 BSCL2-023 protein_coding Homo_sapiens 8.99634e-43 178
ENST00000532115 BSCL2-017 processed_transcript Homo_sapiens 2.99878e-43 178
ENST00000532818 BSCL2-019 protein_coding Homo_sapiens 0 401
ENST00000533982 BSCL2-024 protein_coding Homo_sapiens 0 464
ENST00000537604 BSCL2-029 processed_transcript Homo_sapiens 0 305

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