C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TROVE domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159879 Trove2-001 ENSMUSG00000018199 10090 - 1:143750790-143777068 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159879
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159879 2.663±1.07 1.486±0.32 4.017±0.27 5.118±2.42 1.449±0.17 1.353±0.29 1.401±0.16 2.066±0.20 0.525±0.27 5.790±0.32 0.451±0.06 2.747±0.58 1.296±0.48 0.258±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002520 IMP immune system development
GO:0003723 IDA RNA binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0007224 IMP smoothened signaling pathway
GO:0009411 IMP response to UV
GO:0030529 ISS ribonucleoprotein complex
GO:0030620 IDA U2 snRNA binding
GO:0034336 ISO misfolded RNA binding
GO:0046872 IEA metal ion binding
GO:0060271 IMP cilium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367441 TROVE2-002 protein_coding Homo_sapiens 0 1692
ENST00000367443 TROVE2-003 protein_coding Homo_sapiens 0 1570
ENST00000367444 TROVE2-006 protein_coding Homo_sapiens 0 1570
ENST00000367445 TROVE2-005 protein_coding Homo_sapiens 0 1640
ENST00000367446 TROVE2-001 protein_coding Homo_sapiens 0 1908
ENST00000400968 TROVE2-004 protein_coding Homo_sapiens 0 1692
ENST00000432079 TROVE2-008 protein_coding Homo_sapiens 0 1345
ENST00000460715 TROVE2-007 processed_transcript Homo_sapiens 0 1037

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