C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159917 Pcmt1-002 ENSMUSG00000019795 10090 - 10:7629381-7663303 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000159917
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000159917 4.271±1.49 4.196±0.00 14.083±1.44 18.206±3.00 5.797±1.54 6.409±1.16 8.398±0.99 4.161±0.49 7.345±4.43 8.214±1.80 36.278±1.27 4.971±1.76 5.347±1.48 18.443±1.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X2 CIL_0005X2_0002 CGP 10:7589800-7681136
CIL_00050T CIL_00050T_0002 CGP 10:7629373-7681136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004719 IDA protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0005737 IEA cytoplasm
GO:0006479 IDA protein methylation
GO:0008757 IEA S-adenosylmethionine-dependent methyltransferase activity
GO:0046498 IEA S-adenosylhomocysteine metabolic process
GO:0046500 IEA S-adenosylmethionine metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367378 PCMT1-004 protein_coding Homo_sapiens 0 1190
ENST00000367380 PCMT1-201 protein_coding Homo_sapiens 0 1232
ENST00000367384 PCMT1-001 protein_coding Homo_sapiens 0 1131
ENST00000460828 PCMT1-006 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000464889 PCMT1-002 protein_coding Homo_sapiens 0 1738
ENST00000480010 PCMT1-005 processed_transcript Homo_sapiens 0 206
ENST00000484601 PCMT1-003 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000486585 PCMT1-007 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000494411 PCMT1-009 nonsense_mediated_decay Homo_sapiens 0 507
ENST00000495487 PCMT1-008 protein_coding Homo_sapiens 0 420
ENST00000544496 PCMT1-202 protein_coding Homo_sapiens 0 1090

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