C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00050T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000015201-ENSDARG00000043884 CGP 7955 20:1317297-1351168
GeneTranscriptPositionBiotype
ENSDARG00000015201 (pcmt)
l-isoaspartyl protein carboxyl methyltransferase 		ENSDART00000092718 (pcmt-201) 1317299-1337704 protein_coding
ENSDART00000144288 (pcmt-001) 1317297-1337846 protein_coding
ENSDART00000152436 (pcmt-002) 1319451-1337664 protein_coding
ENSDARG00000043884 (nup43)
nucleoporin 43 		ENSDART00000064439 (nup43-001) 1339804-1351168 protein_coding
ENSDART00000152165 (nup43-002) 1340140-1348304 protein_coding
ENSDART00000152586 (nup43-003) 1340112-1346364 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00050T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019795-ENSMUSG00000019795 CGP 10090 10:7629373-7681136
GeneTranscriptPositionBiotype
ENSMUSG00000040034 (Nup43)
nucleoporin 43 		ENSMUST00000040135 (Nup43-001) 7667503-7678881 protein_coding
ENSMUST00000161060 (Nup43-004) 7670755-7675254 retained_intron
ENSMUST00000162346 (Nup43-003) 7667514-7668291 retained_intron
ENSMUST00000162527 (Nup43-002) 7667540-7676080 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050T_0001ENSDARG00000015201ENSDART00000092718ENSDART00000144288ENSDART00000152436ENSDARG00000043884ENSDART00000064439ENSDART00000152165ENSDART00000152586CIL_00050T_0002ENSMUSG00000040034ENSMUST00000040135ENSMUST00000161060ENSMUST00000162346ENSMUST00000162527
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00050T_0001ENSDARG00000015201ENSDART00000092718ENSDART00000144288ENSDART00000152436ENSDARG00000043884ENSDART00000064439CIL_00050T_0002ENSMUSG00000040034ENSMUST00000040135ENSMUST00000161060ENSMUST00000162346ENSMUST00000162527
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000015201 ENSDART00000092718 N/A N/A N/A 22.807±6.48 N/A N/A 10.551±7.63 3.639±1.25 1.053±0.00 N/A 8.195±0.00 N/A N/A N/A
ENSDART00000144288 N/A N/A N/A 13.045±0.00 N/A N/A 6.345±0.00 N/A 0.218±0.00 N/A N/A N/A N/A N/A
ENSDART00000152436 N/A N/A N/A N/A N/A N/A 23.330±0.00 N/A 0.837±0.00 N/A 16.238±0.00 N/A N/A N/A
ENSDARG00000043884 ENSDART00000064439 N/A N/A N/A 4.622±0.26 N/A N/A 3.067±2.07 7.524±2.39 1.480±0.00 N/A 4.898±0.00 N/A N/A N/A
ENSDART00000152165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040034 ENSMUST00000040135 4.056±1.38 1.949±0.88 4.679±0.73 6.801±4.67 3.057±1.85 2.823±0.94 1.780±0.56 3.724±0.59 9.562±9.58 2.479±0.39 2.372±0.21 5.532±1.87 11.619±7.57 12.428±3.85
ENSMUST00000161060 N/A N/A N/A N/A N/A 0.919±0.00 0.467±0.00 N/A 0.607±0.00 0.650±0.00 N/A N/A N/A N/A
ENSMUST00000162346 N/A N/A N/A 2.949±0.00 N/A N/A N/A N/A N/A N/A N/A 7.977±0.00 13.070±8.41 28.019±0.00
ENSMUST00000162527 N/A 0.227±0.04 N/A N/A N/A N/A N/A N/A 0.171±0.02 N/A N/A 1.086±0.00 0.154±0.00 N/A

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