C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thymocyte selection associated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159927 Themis-002 ENSMUSG00000049109 10090 + 10:28668627-28883818 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000159927
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000159927 0.025±0.02 0.004±0.00 0.248±0.00 0.031±0.00 0.019±0.01 0.043±0.03 0.014±0.02 0.060±0.02 0.044±0.00 0.013±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005911 IDA cell-cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368248 THEMIS-201 protein_coding Homo_sapiens 0 1339
ENST00000368250 THEMIS-001 protein_coding Homo_sapiens 0 1339
ENST00000537166 THEMIS-202 protein_coding Homo_sapiens 0 1339
ENST00000610842 THEMIS-203 protein_coding Homo_sapiens 0 1339
ENST00000613862 THEMIS-204 protein_coding Homo_sapiens 0 1339
ENST00000614155 THEMIS-205 protein_coding Homo_sapiens 0 1339

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