C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 21A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000159961 Phf21a-010 ENSMUSG00000058318 10090 + 2:92228479-92360430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000159961
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000159961 3.734±0.00 4.500±0.00 9.110±0.00 5.267±2.09 4.199±0.41 2.761±0.91 4.087±0.32 1.743±0.58 1.430±0.32 18.407±1.93 5.064±2.19 7.071±4.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001967 IMP suckling behavior
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0005634 IDA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323180 PHF21A-002 protein_coding Homo_sapiens 0 983
ENST00000418153 PHF21A-004 protein_coding Homo_sapiens 0 2023
ENST00000524497 PHF21A-021 protein_coding Homo_sapiens 0 309
ENST00000525676 PHF21A-016 protein_coding Homo_sapiens 0 303
ENST00000527401 PHF21A-003 retained_intron Homo_sapiens 0 1724
ENST00000527753 PHF21A-015 processed_transcript Homo_sapiens 0 619
ENST00000529734 PHF21A-007 protein_coding Homo_sapiens 0 309
ENST00000529782 PHF21A-011 protein_coding Homo_sapiens 0 265
ENST00000530587 PHF21A-017 nonsense_mediated_decay Homo_sapiens 0 388
ENST00000531959 PHF21A-020 protein_coding Homo_sapiens 0 309
ENST00000532028 PHF21A-018 protein_coding Homo_sapiens 0 492
ENST00000532883 PHF21A-013 nonsense_mediated_decay Homo_sapiens 8e-29 132
ENST00000533757 PHF21A-009 protein_coding Homo_sapiens 5e-28 128
ENST00000534766 PHF21A-022 retained_intron Homo_sapiens 0 414

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