C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: contactin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160216 Cntn5-001 ENSMUSG00000039488 10090 - 9:9660969-10904775 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLungOvaryPlacentaENSMUST00000160216
Transcript ID Bladder Brain Colon Lung Ovary Placenta
ENSMUST00000160216 0.012±0.00 0.584±0.00 0.016±0.00 0.010±0.00 0.070±0.00 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CN CIL_0003CN_0002 CGP 9:8994329-10904775

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007605 IMP sensory perception of sound
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000279463 CNTN5-201 protein_coding Homo_sapiens 0 3760
ENST00000418526 CNTN5-004 protein_coding Homo_sapiens 0 3574
ENST00000524560 CNTN5-005 processed_transcript Homo_sapiens 0 1362
ENST00000524871 CNTN5-001 protein_coding Homo_sapiens 0 3862
ENST00000525236 CNTN5-009 processed_transcript Homo_sapiens 0 429
ENST00000527185 CNTN5-003 protein_coding Homo_sapiens 0 3162
ENST00000528682 CNTN5-006 protein_coding Homo_sapiens 0 3818
ENST00000528727 CNTN5-002 retained_intron Homo_sapiens 0 2392
ENST00000619298 CNTN5-202 protein_coding Homo_sapiens 0 3574

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