C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160250 Pcmt1-003 ENSMUSG00000019795 10090 - 10:7639659-7663608 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverOvaryTestisENSMUST00000160250
Transcript ID Adrenal Breast Colon Kidney Liver Ovary Testis
ENSMUST00000160250 6.602±2.51 5.236±0.77 9.229±2.47 10.756±1.27 6.805±2.03 5.168±1.69 26.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X2 CIL_0005X2_0002 CGP 10:7589800-7681136
CIL_00050T CIL_00050T_0002 CGP 10:7629373-7681136

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367378 PCMT1-004 protein_coding Homo_sapiens 0 963
ENST00000367380 PCMT1-201 protein_coding Homo_sapiens 0 396
ENST00000367384 PCMT1-001 protein_coding Homo_sapiens 0 963
ENST00000460828 PCMT1-006 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000464889 PCMT1-002 protein_coding Homo_sapiens 0 963
ENST00000484601 PCMT1-003 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000486585 PCMT1-007 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000494411 PCMT1-009 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000495487 PCMT1-008 protein_coding Homo_sapiens 0 420
ENST00000544496 PCMT1-202 protein_coding Homo_sapiens 0 604

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