C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 41
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160801 Wdr41-001 ENSMUSG00000042015 10090 + 13:94976348-95023313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160801
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160801 8.459±1.30 9.294±0.97 11.513±2.05 8.403±2.76 8.560±0.92 5.654±0.95 6.779±1.15 6.466±0.36 3.761±0.59 8.474±0.93 7.047±0.51 12.728±7.96 3.564±1.56 3.928±1.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091C CIL_00091C_0002 VISTA 13:94401860-95002912
CIL_0007SL CIL_0007SL_0002 VISTA 13:94405527-95008908
CIL_00091B CIL_00091B_0002 VISTA 13:94409854-95010891
CIL_0008DK CIL_0008DK_0002 VISTA 13:94516164-95118068
CIL_00091A CIL_00091A_0002 VISTA 13:94568895-95169433
CIL_000979 CIL_000979_0002 VISTA 13:94573844-95174877
CIL_000239 CIL_000239_0002 CGP 13:94875602-95023314
CIL_0000CH CIL_0000CH_0002 CGP 13:94976344-95250336

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005765 IEA lysosomal membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296679 WDR41-001 protein_coding Homo_sapiens 0 1267
ENST00000414719 WDR41-201 protein_coding Homo_sapiens 0 1260
ENST00000502528 WDR41-007 retained_intron Homo_sapiens 0 885
ENST00000507029 WDR41-003 protein_coding Homo_sapiens 0 1061
ENST00000507654 WDR41-021 protein_coding Homo_sapiens 0 429
ENST00000509701 WDR41-005 nonsense_mediated_decay Homo_sapiens 0 424
ENST00000511630 WDR41-028 protein_coding Homo_sapiens 0 455
ENST00000511791 WDR41-011 protein_coding Homo_sapiens 0 298
ENST00000512033 WDR41-030 processed_transcript Homo_sapiens 0 209
ENST00000515253 WDR41-006 protein_coding Homo_sapiens 0 737

Loading