C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007SL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1783 VISTA 9606 5:77545919-78149307
GeneTranscriptPositionBiotype
ENSG00000132842 (AP3B1)
adaptor-related protein complex 3, beta 1 subunit 		ENST00000255194 (AP3B1-001) 78000525-78294755 protein_coding
ENST00000517561 (AP3B1-004) 78121722-78141170 processed_transcript
ENST00000517940 (AP3B1-009) 78088981-78116187 retained_intron
ENST00000519295 (AP3B1-002) 78002326-78294692 protein_coding
ENST00000519888 (AP3B1-005) 78087496-78113770 processed_transcript
ENST00000520122 (AP3B1-008) 78002995-78015873 retained_intron
ENST00000522901 (AP3B1-007) 78002338-78039150 protein_coding
ENST00000523204 (AP3B1-006) 78020708-78043250 processed_transcript
ENSG00000164253 (WDR41)
WD repeat domain 41 		ENST00000296679 (WDR41-001) 77430933-77492596 protein_coding
ENST00000414719 (WDR41-201) 77432245-77492289 protein_coding
ENST00000502528 (WDR41-007) 77432244-77452873 retained_intron
ENST00000503035 (WDR41-010) 77451291-77492477 nonsense_mediated_decay
ENST00000504895 (WDR41-024) 77453866-77491285 protein_coding
ENST00000505129 (WDR41-002) 77440817-77492496 nonsense_mediated_decay
ENST00000506307 (WDR41-013) 77440931-77492223 nonsense_mediated_decay
ENST00000506474 (WDR41-017) 77453889-77492220 nonsense_mediated_decay
ENST00000507029 (WDR41-003) 77432893-77492316 protein_coding
ENST00000507239 (WDR41-014) 77458859-77492222 retained_intron
ENST00000507452 (WDR41-020) 77449765-77492215 processed_transcript
ENST00000507654 (WDR41-021) 77436379-77492203 protein_coding
ENST00000508154 (WDR41-029) 77426654-77433159 processed_transcript
ENST00000509701 (WDR41-005) 77437407-77492220 nonsense_mediated_decay
ENST00000509858 (WDR41-027) 77463093-77620576 processed_transcript
ENST00000509892 (WDR41-019) 77449804-77492215 nonsense_mediated_decay
ENST00000509971 (WDR41-025) 77453879-77620611 protein_coding
ENST00000511036 (WDR41-009) 77451324-77492487 protein_coding
ENST00000511630 (WDR41-028) 77436360-77451353 protein_coding
ENST00000511791 (WDR41-011) 77438258-77492287 protein_coding
ENST00000512033 (WDR41-030) 77426652-77436279 processed_transcript
ENST00000512168 (WDR41-008) 77463124-77492507 processed_transcript
ENST00000513417 (WDR41-018) 77449831-77492220 nonsense_mediated_decay
ENST00000513917 (WDR41-023) 77463106-77499636 processed_transcript
ENST00000514451 (WDR41-022) 77463106-77492003 processed_transcript
ENST00000514559 (WDR41-015) 77451291-77492222 protein_coding
ENST00000514878 (WDR41-031) 77425970-77432955 processed_transcript
ENST00000515253 (WDR41-006) 77432813-77492199 protein_coding
ENST00000515321 (WDR41-016) 77449815-77492221 processed_transcript
ENSG00000171530 (TBCA)
tubulin folding cofactor A 		ENST00000306388 (TBCA-002) 77691241-77776287 protein_coding
ENST00000380377 (TBCA-001) 77691166-77776361 protein_coding
ENST00000517679 (TBCA-003) 77691241-77715317 protein_coding
ENST00000517881 (TBCA-009) 77691259-77694277 processed_transcript
ENST00000518218 (TBCA-008) 77691241-77708613 retained_intron
ENST00000518338 (TBCA-004) 77691267-77776261 protein_coding
ENST00000520039 (TBCA-007) 77693266-77776274 protein_coding
ENST00000520361 (TBCA-006) 77691248-77776293 protein_coding
ENST00000522370 (TBCA-005) 77691404-77868780 protein_coding
ENSG00000171540 (OTP)
orthopedia homeobox 		ENST00000306422 (OTP-001) 77628712-77639688 protein_coding
ENST00000515716 (OTP-002) 77635931-77636993 processed_transcript
ENSG00000213763 (ACTBP2)
actin, beta pseudogene 2 		ENST00000515712 (ACTBP2-001) 77784881-77786003 processed_pseudogene
ENSG00000222085 (AC024568.1)
 ENST00000410153 (AC024568.1-201) 78056624-78056746 miRNA
ENSG00000244019 (RPS2P24)
ribosomal protein S2 pseudogene 24 		ENST00000494599 (RPS2P24-001) 77545397-77546266 processed_pseudogene
ENSG00000244363 (RPL7P23)
ribosomal protein L7 pseudogene 23 		ENST00000493874 (RPL7P23-001) 77582376-77583122 processed_pseudogene
ENSG00000253558 (CTD-2179L22.1)
 ENST00000517330 (CTD-2179L22.1-001) 78041879-78044138 transcribed_processed_pseudogene
ENSG00000253572 (RP11-107N7.1)
 ENST00000523413 (RP11-107N7.1-001) 77942757-77946438 lincRNA
CIL_0007SL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1783 VISTA 10090 13:94405527-95008908
GeneTranscriptPositionBiotype
ENSMUSG00000021685 (Otp)
orthopedia homolog (Drosophila) 		ENSMUST00000022195 (Otp-001) 94875602-94885130 protein_coding
ENSMUST00000184985 (Otp-002) 94882600-94883552 processed_transcript
ENSMUSG00000021686 (Ap3b1)
adaptor-related protein complex 3, beta 1 subunit 		ENSMUST00000022196 (Ap3b1-201) 94358960-94566316 protein_coding
ENSMUSG00000042015 (Wdr41)
WD repeat domain 41 		ENSMUST00000056512 (Wdr41-201) 94976348-95023314 protein_coding
ENSMUST00000159647 (Wdr41-004) 94976438-95014477 protein_coding
ENSMUST00000160115 (Wdr41-002) 94976344-95014531 protein_coding
ENSMUST00000160409 (Wdr41-003) 94976438-95014477 protein_coding
ENSMUST00000160801 (Wdr41-001) 94976348-95023313 protein_coding
ENSMUST00000167155 (Wdr41-202) 94976438-95014477 protein_coding
ENSMUSG00000042043 (Tbca)
tubulin cofactor A 		ENSMUST00000046644 (Tbca-201) 94788943-94842899 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007SL_0001ENSG00000132842ENST00000255194ENST00000517940ENST00000519295ENST00000519888ENST00000522901ENSG00000164253ENST00000296679ENST00000414719ENST00000502528ENST00000506474ENST00000507029ENST00000507239ENST00000507452ENST00000515253ENSG00000171530ENST00000306388ENST00000380377ENST00000517881ENST00000518218ENST00000518338ENST00000520361ENST00000522370ENSG00000171540ENST00000306422ENST00000515716ENSG00000213763ENST00000515712ENSG00000222085ENST00000410153ENSG00000244019ENST00000494599ENSG00000244363ENST00000493874ENSG00000253558ENST00000517330ENSG00000253572ENST00000523413CIL_0007SL_0002ENSMUSG00000021685ENSMUST00000022195ENSMUST00000184985ENSMUSG00000021686ENSMUST00000022196ENSMUSG00000042015ENSMUST00000056512ENSMUST00000160115ENSMUST00000160801ENSMUSG00000042043ENSMUST00000046644
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132842 ENST00000255194 N/A 0.503±0.00 N/A N/A N/A N/A 0.295±0.00 N/A 0.541±0.31 N/A N/A N/A N/A N/A
ENST00000517561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517940 N/A N/A N/A N/A N/A N/A N/A 2.099±0.00 N/A N/A N/A 4.171±0.00 N/A 4.514±0.00
ENST00000519295 10.931±0.00 5.054±0.00 3.995±0.00 3.342±0.77 5.141±1.90 6.256±1.66 3.134±1.62 6.777±4.00 2.401±0.34 2.910±0.35 1.591±1.15 5.078±1.70 10.379±3.73 6.250±0.76
ENST00000519888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.783±0.00 N/A N/A N/A
ENST00000520122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522901 N/A 2.816±0.00 N/A N/A N/A N/A N/A 6.429±0.00 3.157±0.00 3.613±0.00 1.778±0.00 5.560±0.00 N/A N/A
ENST00000523204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164253 ENST00000296679 1.959±0.00 0.810±0.00 1.096±0.00 4.530±0.00 1.706±0.00 1.779±0.23 0.971±0.38 1.751±0.00 1.438±0.64 2.524±0.78 0.561±0.00 1.570±0.91 1.521±0.23 2.196±0.34
ENST00000414719 N/A 2.286±0.00 N/A 8.403±0.00 5.757±0.00 N/A 1.061±0.32 N/A 2.042±1.11 1.797±0.00 0.786±0.07 3.139±0.49 3.340±1.40 5.582±0.45
ENST00000502528 N/A N/A 1.313±0.00 N/A 1.801±0.00 N/A 0.452±0.00 N/A N/A 3.273±0.00 N/A 1.010±0.00 N/A N/A
ENST00000503035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505129 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506474 N/A N/A 6.812±0.00 N/A 16.055±0.00 7.911±0.00 8.264±0.00 9.235±0.00 N/A 17.277±0.00 12.781±0.00 7.609±0.00 N/A N/A
ENST00000507029 4.325±0.00 1.868±0.00 N/A N/A N/A N/A 3.538±0.00 6.377±0.00 1.531±0.00 4.122±0.00 0.713±0.00 N/A N/A 7.598±2.95
ENST00000507239 N/A N/A N/A N/A N/A 7.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.409±0.00 N/A N/A N/A
ENST00000507654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514559 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514878 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515253 N/A N/A N/A N/A N/A 2.650±0.00 N/A 2.929±0.00 N/A N/A 1.089±0.00 1.310±0.00 N/A N/A
ENST00000515321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171530 ENST00000306388 N/A N/A N/A N/A N/A 0.722±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000380377 21.352±0.00 20.480±0.00 5.943±0.00 22.046±0.51 9.742±0.40 12.481±6.33 9.842±3.69 28.038±0.44 13.139±0.88 8.971±1.38 3.156±0.00 57.149±35.42 61.948±18.58 37.383±1.51
ENST00000517679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517881 24.313±0.00 25.150±0.00 N/A 37.074±0.00 34.826±0.00 41.779±0.00 17.647±0.00 76.048±0.00 32.665±0.00 16.397±0.00 N/A 51.914±18.06 41.469±2.94 50.829±0.00
ENST00000518218 N/A N/A N/A N/A N/A 2.311±0.00 N/A N/A N/A N/A N/A 2.433±0.00 N/A N/A
ENST00000518338 7.066±0.00 16.839±0.00 N/A N/A 13.374±0.00 20.346±0.00 N/A N/A 16.829±0.00 11.242±0.00 N/A 19.594±0.00 36.008±0.00 27.180±0.00
ENST00000520039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520361 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.021±0.00 16.244±0.00 N/A N/A N/A
ENST00000522370 N/A N/A N/A 20.901±0.00 14.659±0.00 19.557±0.00 10.965±0.00 47.282±0.00 29.494±0.00 29.775±0.00 19.945±0.00 N/A N/A N/A
ENSG00000171540 ENST00000306422 N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A 0.143±0.02
ENST00000515716 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00
ENSG00000213763 ENST00000515712 N/A 0.914±0.00 N/A 0.150±0.10 0.748±0.00 0.546±0.00 N/A 0.209±0.00 0.352±0.00 0.566±0.00 0.292±0.00 N/A 0.127±0.07 0.583±0.00
ENSG00000222085 ENST00000410153 N/A N/A 21.163±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.095±0.00 N/A N/A
ENSG00000244019 ENST00000494599 0.121±0.00 0.077±0.00 N/A N/A N/A 0.352±0.00 0.024±0.00 0.054±0.00 0.046±0.00 0.281±0.00 0.311±0.00 0.034±0.00 0.058±0.00 0.191±0.00
ENSG00000244363 ENST00000493874 0.210±0.00 0.310±0.00 N/A 0.063±0.01 0.164±0.02 0.224±0.11 0.035±0.00 0.074±0.00 0.050±0.02 0.293±0.05 0.114±0.00 0.558±0.50 0.602±0.49 0.230±0.16
ENSG00000253558 ENST00000517330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A
ENSG00000253572 ENST00000523413 N/A 0.091±0.00 N/A 0.075±0.00 0.140±0.00 N/A 0.050±0.00 N/A N/A 0.046±0.00 0.016±0.00 N/A N/A 0.066±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021685 ENSMUST00000022195 N/A N/A N/A 6.950±5.59 N/A N/A N/A N/A 0.004±0.00 N/A N/A N/A 0.009±0.00 0.016±0.00
ENSMUST00000184985 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 0.060±0.03
ENSMUSG00000021686 ENSMUST00000022196 11.009±0.98 8.544±2.85 14.372±1.30 8.804±1.02 8.966±1.58 13.478±0.93 4.370±0.20 10.695±1.05 8.162±1.35 8.267±0.87 2.307±0.67 12.391±5.58 26.293±7.29 38.745±11.75
ENSMUSG00000042015 ENSMUST00000056512 N/A 3.251±0.99 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160115 N/A 4.622±0.88 N/A N/A N/A 0.630±0.00 N/A N/A N/A 1.653±0.19 N/A 2.871±0.70 N/A N/A
ENSMUST00000160409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160801 8.459±1.30 9.294±0.97 11.513±2.05 8.403±2.76 8.560±0.92 5.654±0.95 6.779±1.15 6.466±0.36 3.761±0.59 8.474±0.93 7.047±0.51 12.728±7.96 3.564±1.56 3.928±1.24
ENSMUST00000167155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042043 ENSMUST00000046644 10.676±1.15 1.121±0.30 167.377±9.01 126.820±11.40 5.926±3.16 5.369±0.87 14.484±5.69 19.282±3.97 75.375±75.31 9.733±4.11 26.448±2.37 94.249±174.74 282.514±123.48 142.063±214.01

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